top of page

PTL book
 

200 results found with an empty search

  • Non-volatile device architecture using quantum dot cellular a | Physics Tomorrow

    Non-volatile device is proposed in this article based on quantum-dot cellular automata architecture, which will be efficiently useful as a binary qubit system. In standards, today' theoretical researches are going on the volatile QCA gates, which are efficient well in performance towards the rapid b Non-volatile device architecture using quantum dot cellular automata Soudip Sinha Roy 1 || Anusua Chakraborty 2 Non-volatile device is proposed in this article based on quantum-dot cellular automata architecture, which will be efficiently useful as a binary qubit system. In standards, today's theoretical researches are going on the volatile QCA gates, which are efficient well in performance towards the rapid binary data computation. However, what if it can store some data for a while. ? Therefore, a novel methodology has been proposed theoretically towards the non-volatility of the QCA cells. As expected that this gate would be able to exhibit the non-volatility.

  • Pdf | Physics Tomorrowhttps://static.wixstatic.com/media/04176b_8a165ed0f46f43d09e08845ad6136171~mv2.jpg https://static.wixstatic.com/media/04176b_8a165ed0f46f43d09e08845ad6136171%7Emv2.jpg

    Physics Tomorrow Letters is the online research publication platform. SCI and Scopus indexed journal. Rapid publication. https://static.wixstatic.com/media/04176b_8a165ed0f46f43d09e08845ad6136171~mv2.jpg Fabrication of Non-volatile Charge Storage Memory Device by Novel doped ZnO nanoparticles with 4.79 eV bandgap Soudip Sinha Roy Theoretical Physicist Quantumorbit Synthesis Pvt. Ltd., India soudipsinharoy@(gmail.com, physicist.net) 19 Dec. 2018 Download full text Read Vol. 1 submission is over. Read the vol. 2 papers. Submit your paper at, ptlsubmission@gmail.com

  • An Explanatory Model of Heavy Quarks and Particles Generating resulted by a Cold Genesis TheoryArhjrescu S. Marius

    Theoretical Physics Letters HOME JOURNALS PRICING AND PLANS SUBMIT Locked Tphysicsletters/vol-09/no-11/An Explanatory Model of Heavy Quarks and Particles Generating resulted by a Cold Genesis Theory Citation (0) PREMIUM Thursday, July 29, 2021 at 12:30:00 PM UTC Request Open Apply Now Locked DOI: 10.1490/100236.254ptl An Explanatory Model of Heavy Quarks and Particles Generating resulted by a Cold Genesis Theory Arhjrescu S. Marius ! Widget Didn’t Load Check your internet and refresh this page. If that doesn’t work, contact us. TOA Abstract Introduction Conclusion Unlock Only Changeover the Schrödinger Equation This option will drive you towards only the selected publication. If you want to save money then choose the full access plan from the right side. Unlock all Get access to entire database This option will unlock the entire database of us to you without any limitations for a specific time period. This offer is limited to 100000 clients if you make delay further, the offer slots will be booked soon. Afterwards, the prices will be 50% hiked. Buy Unlock us Newsletters ! Widget Didn’t Load Check your internet and refresh this page. If that doesn’t work, contact us. ! Widget Didn’t Load Check your internet and refresh this page. If that doesn’t work, contact us. ! Widget Didn’t Load Check your internet and refresh this page. If that doesn’t work, contact us. TOC (TphysicsLetters) TOC (TphysicsLetters) The Nature of the 1 MeV-Gamma Quantum in a Classic Interpretation of the Quantum Nebular spectra from Type Ia supernov Physics Tomorrow TOC HIGHLIGHTS 2023 TOC HIGHLIGHTS 2023 Theoretical Physics Letters Physics Tomorrow ZZ Ceti stars of the southern ecliptic hemisphere re-observed by TESS ZZ Ceti stars of the southern ecliptic hemisphere re-observed by TESS Physics Tomorrow ! Widget Didn’t Load Check your internet and refresh this page. If that doesn’t work, contact us. Abstract Introduction Conclusion References All Products Quick View Newly listed Tphysletters A Unifying Bag Model of Composite Fermionic Structures in a Cold Genesis Theory Regular Price $700.00 Sale Price $400.00 Excluding Sales Tax Quick View TphysicsLetters Detection of the large-scale tidal field with galaxy multiplet alignment in the Regular Price $1,900.00 Sale Price $950.00 Excluding Sales Tax Quick View Newly listed Tphysletters Violation of γ in Brans-Dicke gravity Regular Price $1,000.00 Sale Price $600.00 Excluding Sales Tax Quick View Astrophysics Observations and detectability of young Suns’ flaring and CME activity in optica Regular Price $1,000.00 Sale Price $450.00 Excluding Sales Tax Quick View TphysicsLetters Tunable structure-activity correlations of molybdenum dichalcogenides (MoX2; X=S Regular Price $2,000.00 Sale Price $400.00 Excluding Sales Tax Quick View New Thphysletters Bayesian and frequentist investigation of prior effects in EFTofLSS analyses of Regular Price $3,000.00 Sale Price $370.00 Excluding Sales Tax Quick View New Thphysletters A search for faint resolved galaxies beyond the Milky Way in DES Year 6: A new f Regular Price $1,900.00 Sale Price $750.00 Excluding Sales Tax Quick View New X-ray polarization properties of partially ionized equatorial obscurers around a Regular Price $800.00 Sale Price $350.00 Excluding Sales Tax Quick View New Unravelling multi-temperature dust populations in the dwarf galaxy Holmberg II Regular Price $1,200.00 Sale Price $400.00 Excluding Sales Tax Quick View New SpookyNet: Advancement in Quantum System Analysis through Convolutional Neural N Regular Price $1,500.00 Sale Price $500.00 Excluding Sales Tax Quick View New Rapid neutron star cooling triggered by accumulated dark matter Regular Price $1,500.00 Sale Price $500.00 Excluding Sales Tax Quick View Newly listed Tphysletters Searching for Radio Outflows from M31* with VLBI Observations Price $300.00 Excluding Sales Tax Quick View New Thphysletters Measurement of the scaling slope of compressible magnetohydrodynamic turbulence Regular Price $680.00 Sale Price $612.00 Excluding Sales Tax Quick View MAKE OPEN ACCESS New method to revisit the gravitational lensing analysis of the Bullet Cluster u Price $1,030.00 Excluding Sales Tax Quick View New Thphysletters New method to revisit the gravitational lensing analysis of the Bullet Cluster u Regular Price $599.00 Sale Price $359.40 Excluding Sales Tax Quick View New Nebular spectra from Type Ia supernova explosion models compared to JWST observa Regular Price $503.00 Sale Price $271.62 Excluding Sales Tax Quick View New Thphysletters The Nature of the 1 MeV-Gamma quantum in a Classic Interpretation of the Quantum Price $399.00 Excluding Sales Tax Quick View Exceptional Classifications of Non-Hermitian Systems Price $399.00 Excluding Sales Tax Quick View New Thphysletters On the occurrence of stellar fission in binary-driven hypernovae Price $399.00 Excluding Sales Tax Quick View New ApplSciLettersA AC frequency influence on pump temperature Price $399.00 Excluding Sales Tax Quick View New ApplSciLett. Perturbative aspects of mass dimension one fermions non-minimally coupled to ele Regular Price $399.00 Sale Price $319.20 Excluding Sales Tax Quick View ZZ Ceti stars of the southern ecliptic hemisphere re-observed by TESS Price $200.00 Excluding Sales Tax Quick View New Thphysletters Magnetic reconnection as an erosion mechanism for magnetic switchbacks Price $490.00 Excluding Sales Tax Quick View New Thphysletters Calculation of the Hubble Constant, the Minimum Mass, and the Proton Charge Radi Price $499.00 Excluding Sales Tax Featured Changeover the Schrödinger Equation $100.00 Price Excluding Sales Tax View Details

  • Physics Tomorrow Letters privacy policy

    Physics Tomorrow Letters privacy policy. PTL always publishes the article by open access right. In special cases, authors can request the non-open access for any particular article with an appropriate reason. PTL has the right to change any terms at any time without any notice. Basic information Home Support About Email Submit your manucript Online submssion Email submission Impact factors Join as Editor Reviewer Read Priprints release Extended indexing Science Citation (SCI) Scopus Submission is open Website is designed simply. Get anything form the search bar. PTL fellowship Best paper award Research sponsorship June submissions will be eligible for award and fellowship. Get is published earlier to apply for it later. PTL Privacy Policy We respect your concerns regarding privacy on the Internet and value the relationship we have with you. This policy outlines our efforts to protect your privacy, what kind of your data we collect and what we will do with the collected data. PTL is an open-access publisher and provides platforms for open scientific exchange. This Privacy Policy affects all websites and services that PTL provides, including, but not limited to, Sciforum , Preprints , Scilit , Encyclopedia , WS forum. Protection of Your Information All data we collect from you on our websites is protected against unauthorized access by third parties. We do our utmost to protect your privacy through the appropriate use of security technologies and physical safeguards. Via the website, PTL may offer via its website third-party services, such as article recommendations, social login, social sharing, and banners to third-party sites. Information which is collected by PTL when you access third-party services is processed under this Privacy Policy, while information collected by third-party operators themselves will be governed by their own privacy policies. Our websites may use Google Analytics to help us collect information about how visitors use our sites. We use this information to compile reports and to help us improve the sites. The cookies collect information in an anonymous form, including the number of visitors to a site, where visitors have navigated to a site from and the pages they visit whilst on a site. To view Google’s Privacy Policy, see here . You can configure your browser to opt out of providing data to Google Analytics by using the browser add-on provided by Google here . User Accounts, Registration and Personalized Services To make use of personalised services, you will have to register a user account with our websites. During registration , we will ask you to provide some personal information, including, but not limited to, your name, valid e-mail address, affiliation, postal address, phone number, password, academic degree, position within your institution or organization, and your research interests. Some of this information is required to properly set up the user account for you to use all of PTL’s services. PTL may use this information to fulfil our contract with you (e.g. the publication of your article). Furthermore, PTL may also use this information internally, e.g., to evaluate and improve our business, respond to any questions, requests or comments you make, for targeted marketing purposes, or to identify and prevent fraud, claims or other liabilities. PTL may contact you by e-mail to draw your attention to content that might be of interest to you (e.g. new services, products or publications) and for other advertising. If the personal information was provided to us by a third party, PTL may still use this information in the same manner as described above. You will have the chance to opt out of receiving such e-mails by unsubscribing or contacting the PTL customer service at. International Transfer of Personal Data As an international company, PTL may transfer your personal information outside of your country of residence to be stored on our servers. PTL takes steps to ensure your personal information is continued to be protected wherever it is stored and/or processed. Your Rights As a registered user, you can access your account at any time and make corrections or updates. In accordance with existing data privacy law, you may request the information that PTL holds or processes about you. On request, we will also provide you with a copy of all personal information that we possess about you. We will delete this personal information when you request to deactivate your account. However, some personal information may remain in storage for a certain period of time in order to comply with our (legal) obligations and to resolve disputes. Linked Websites PTL may link to other websites not controlled by PTL. Please take note that PTL cannot be held responsible or liable for privacy practices of other websites, nor their services or content. Changes to the Privacy Policy PTL reserves the right to change this Privacy Policy at any time by posting changes without prior notice. Please check this Privacy Policy periodically for any modifications. Your continued use of any service following the posting of any changes will mean that you have accepted and agreed to the changes. How To Contact Us If you have any questions about our Privacy Policy, please contact us at.

  • Books | Physics Tomorrowhttps://static.wixstatic.com/media/04176b_8a165ed0f46f43d09e08845ad6136171~mv2.jpg https://static.wixstatic.com/media/04176b_8a165ed0f46f43d09e08845ad6136171%7Emv2.jpg

    Physics Tomorrow Letters is the online research publication platform. SCI and Scopus indexed journal. Rapid publication. https://static.wixstatic.com/media/04176b_8a165ed0f46f43d09e08845ad6136171~mv2.jpg Physics Tomorrow Books Physics Tomorrow Letters Now publish your book with PTL books. Research on Microscopic properties of the materials Research on Microscopic properties of the materials: Scanning electron microscope. Research on Microscopic properties of the materials Research on Microscopic properties of the materials Research on Microscopic properties of the materials Scanning electron microscopy analysis of the material properties. TEM-images-analysis for material properties Transmission electron microscopy. This is one of the vital elementary material property investigation technique. Scanning electron microscope Scanning electron microscopy analysis of the material properties. Dark matter research Publish your research on the hypo-physics alike dark matter, string theory, relativistic physics etc. Dark matter Physics Tomorrow Books is publishing the best quality books in a database with a dedicated PTBN . PTBN (Physics Tomorrow Book Number) which is similar to ISBN. To make the article unique we index with a unique PTIN that will be searchable on the internet anytime. Benefits Physics Tomorrow Books always provides the best quality book publishing experience. The best method we use for interacting with the authors. We have dedicated 24*7 hours support system which will resolve any of your queries. The book publication honorarium is only 5000 rupees for Indian authors and $101 for international authors. Please read carefully before making a submission. Physics Tomorrow follows the plagiarism policy and publication ethics. The is stated briefly here. You are welcomed to submit your original book, thesis for the possible publication with us. The manuscript review process is completed within 30 days. Physics Tomorrow accepts a maximum of five authors in a single book. Each book will be indexed by a unique PTBN (Physics Tomorrow Book Number) which is similar to ISBN or ASIN . Preparation guidelines for your manuscript. Cover page Author bibliography (for all authors) Abstract Acknowledgement Use if there any dedication page Table of index Author/s' names Author/s' affiliation Author/s' designation Communication email (only provide the corresponding author email in case of multiple authors.) Introduction The main body of the manuscript Conclusion References

  • Statement of Editorial Policy | Physics Tomorrowhttps://static.wixstatic.com/media/04176b_8a165ed0f46f43d09e08845ad6136171~mv2.jpg https://static.wixstatic.com/media/04176b_8a165ed0f46f43d09e08845ad6136171%7Emv2.jpg

    Physics Tomorrow Letters is the online research publication platform. SCI and Scopus indexed journal. Rapid publication. https://static.wixstatic.com/media/04176b_8a165ed0f46f43d09e08845ad6136171~mv2.jpg Statement of Editorial Policy The Physics Tomorrow Letters publishes papers that will support, inform, and delight a diverse audience of college and university physics teachers. It strives to present papers that are not only original, correct, and significant, but also carefully written and interesting to a large number of physics educators. Technical correctness is necessary, but it is not the only condition for acceptance. Clarity of exposition and potential interest to the readers are equally essential. It is the reader, not the author, who must receive the benefit of the doubt. To be publishable in PTL, a manuscript must be written for, and also must be useful, interesting, and accessible to a broad range of physicists. Many of the published papers will be directly useful in the classroom. They may describe new approaches to teaching or present interesting additions to course content and assignments. While most papers will focus on the intermediate and advanced undergraduate curriculum, some will be of interest to instructors in post-graduate programs. Pedagogical value can be added to all articles by including suggested problems or projects for students. Examples include problems with analytical solutions, computational exercises and simulations, and the analysis of experimental data. Papers that introduce new laboratory or demonstration apparatus, techniques, or exercises are also welcomed. Although brief papers that only describe how to build a new apparatus are acceptable, authors are also encouraged to share observations of how students interact with the apparatus. Papers that propose new student experiments based on novel uses of existing apparatus are also acceptable. In all cases, the approximate cost of the apparatus should be included, along with information on how to obtain the components. The Journal invites manuscripts that can be used to bring contemporary research in physics and related fields into the classroom. Such manuscripts should not be review articles, but rather self-contained articles that describe a particular aspect of a research topic in such a way that it is accessible to as many physicists as possible. These articles may be useful to instructors who want to show how a course topic relates to current research and also may introduce undergraduates to current research topics. Shorter manuscripts are generally more desirable than longer ones, and authors should consider submitting longer derivations, additional applications, program scripts, and data tables as supplementary material. Occasionally, review or tutorial articles are published, often of a length greater than that of the average article. These articles are solicited, and thus authors wishing to write such articles must consult with the editors at an early stage. Unlike research journals, which may present accurate research results with little consideration of how many readers will be interested, strives to present a carefully curated sampling of the most readable and interesting articles related to physics teaching. The importance of graceful, clear, accessible writing cannot be overemphasized. Most readers of a particular article will not be specialists in the subject matter presented. The introductory paragraphs should carefully present the context of the new work and should explain how this new work builds on and differs from the cited material. Manuscripts must take proper cognizance of previous work, and authors should be particularly careful to search physics education journals for related work. Such referencing is especially helpful to beginning teachers, and may remind others of once well-known ideas, proofs, or techniques that may again be useful to physics teachers and students. It is the responsibility of the author to provide adequate references to previous work, and submissions that lack them will be returned to the author without review. Contributions are considered for sections including Regular Articles, Notes and Discussion, Instructional Laboratories and Demonstrations, Computational Physics, Guest Editorials, and Letters to the Editor. Regular articles should usually not exceed six journal pages, with notes and other contributions being substantially shorter. Notes are short communications that are usually confined to the discussion of a single concept, or comments on previously published articles. The Instructional Laboratories and Demonstrations section generally focuses on new apparatus and techniques for instructional laboratory exercises and demonstrations. Letters to the Editor are selected for their likely interest to readers. Book Reviews and Resource Letters are solicited, not contributed, and undergo a separate review process. Collegial disagreement has a proper place in the Journal, but extended argumentation does not. To encourage the former and discourage the latter, the editors will forward to authors any communications received that are critical of their published work. Authors and critics will then be asked to correspond directly with one another. If after this correspondence, an improved understanding is reached, they will be encouraged to prepare a brief jointly-authored Note. If such an agreement should prove impossible, the critic’s Note may be published alone, or followed by the authors’ response if it makes a significant addition to the discussion. Letters to the editor are also appropriate for briefer comments on an article; these will be published following the same procedure as for Notes, although without necessarily requiring peer review. In no case will there be more than one round of discussion of a paper. Why was my paper rejected? Papers should significantly aid the learning of physics and not be primarily a display of cleverness and erudition; in fact, the harder a paper is to read, the more useful and rewarding must be its result. The mere solution of a problem seldom constitutes an acceptable contribution, regardless of how difficult the problem, although using undergraduate-level physics to solve interesting or puzzling real-world problems can be valuable. If these topics are studied by specialists in fields outside of physics, then it is essential that the writer is aware of this work and provides citations to the most relevant articles. Manuscripts that show new ways of understanding, explaining, or deriving familiar results must provide some original physical insight and not just be a clever derivation. Manuscripts on topics that largely parallel those already available in textbooks, monographs, or other published articles and that differ from them primarily in style rather than coverage are not suitable contributions. AJP is not a venue to remind readers of previously published ideas and techniques that are not included in current textbooks. Papers on teaching introductory physics that might be of use to both secondary school and university instructors should normally be submitted to PTL other journal, The Physics Teacher. Most papers will be useful around the world, but topics that are only useful outside of the U.S. higher educational system are generally not acceptable. Manuscripts announcing new theoretical or experimental physics research results, or questioning well-established and successful theories, are not acceptable and should be submitted to a research journal for proper vetting. If a manuscript is otherwise acceptable as a contribution, the inclusion of new results is not an insurmountable barrier to publication. For example, some papers will present measurements on mechanical systems with explanations that could supplement undergraduate teaching. Nevertheless, authors of such manuscripts should consider carefully whether PTL is the appropriate venue for presenting their results. In particular, improvements to previous studies (published either in PTL or in other journals) are seldom appropriate, unless the result provides significant new insight that will be valuable to a broad range of physics teachers. For that reason, authors should use caution in submitting manuscripts that solve challenges such as those posed by the International Young Physicists Tournament, since by the time the paper could be published in AJP, its solutions are likely to be well publicized in other venues, and it may be rejected once those solutions have appeared. Manuscripts may clarify past misunderstandings, allow a broader view of a subject, or demonstrate new relations between hitherto unrelated areas of physics. These manuscripts will be judged for their potential interest to readers. Contact I'm always looking for new and exciting opportunities. Let's connect. head.editor@wikipt.org 8327656228 for online customer support

  • On Subquantum Electromagnetic and Gravitational Interactions

    To a greater or lesser extent, gravitational fields are always present in the environment of electromagnetic fields. Gravitational energy will decisively influence the value of electromagnetic energy present. Gravitons interact at subquantum level with photons, influencing the electromagnetic interaction. Moreover, gra

  • Effect of Gd3+ ion concentration on photoluminescence and thermoluminescence studies of Y4Al2O9 phosphor

    Physics Tomorrow Material Science Letters publications. Download all open access papers form here. Share your feedback form the website about any published paper. Home PTL BOND Submission Central Browse Journals Program List More... Material Science Letters Publication archive Basic information Home Support About Email Submit your manucript Online submssion Email submission Impact factors Join as Editor Reviewer Extended indexing Science Citation (SCI) Scopus Submission is open Website is designed simply. Get anything from the search bar. PTL fellowship Best paper award Research sponsorship June submissions will be eligible for award and fellowship. Get is published earlier to apply for it later. Download Citation (0) © PTL OPEN January 8, 2021 at 10:36:31 AM Effect of Gd3+ ion concentration on photoluminescence and thermoluminescence studies of Y4Al2O9 phosphor The current paper reports the synthesis of Gadolinium (Gd) doped Y4Al2O9 phosphor by solid state reaction method. Powder X-beam diffraction (PXRD) tools are very much coordinated with the standard monoclinic system with space group P21/c. XRD investigation reveals that particles size was found in the range ∼60-70 nm. The optical (PL) and thermoluminescence (TL) behavior of Gd doped Y4Al2O9 phosphor were investigated. From the TL data of Y4Al2O9:Gd3+ nanophosphor with UV irradiation, it is observed that considerable amount of re-trapping is taking place in all the TL second order peaks. Photoluminescent spectroscopy (PL) was used to analyse luminescence properties of the prepared phosphor. The emission spectra have peaks centered at 473 nm in blue region. The process of emission mechanism is also discussed. Material Science Letters Keylines Introduction Y4Al2O9 (YAM) Al-oxide or alumina is a technologically important material for many optical, electronic, mechanical and nuclear applications. Because, it offers excellent mechanical properties, good chemical stability, high temperature (2020 ℃), denseness (4.44 g/cm3 ), low high-temperature thermal physical phenomenon and low permeability to rare earth impurity. High Injury tolerant ability, that endure it as a prospective material for thermal and/or environmental barrier coating applications [1-4]. Therefore, it is a promising host material for rare earth ions to produce efficient luminescent media, previous theoretical and experimental investigations have incontestable applications, it's necessary to systematically investigate the structural, optical, thermal, and mechanical properties of YAM. In addition, significant energy transferring from the host material to the RE element is an efficient solution to circumvent the suppressed absorptions of RE ions with the 4f–4f transitions. As a matter of fact, a large range of wavelengths can be emitted from these phosphors because remarkable luminescence quantum yields can be achieved for the f-f transitions [2,5]. The TL properties of Y4Al2O9 (YAM) samples of different dopant materials, which can enhance TL properties, have been studied by several researchers for several decades [5, 6]. Moreover, modification of alumina with transitions and semiconductor elements such as chromium and silicon oxides is expected to increase the number of defects in alumina structure and improve its absorption ability [5-8]. In this work, the role of Gd as dopant introduced in YAM phosphor a nanostructure, prepared by the solid state reaction method, will be explored in details. Various investigations of such newly prepared samples have been carried out leading to great benefit of having an enhanced radiation-dosimetry system through TL studies and optical studies such as PL. The prepared phosphor sample was characterized using XRD for structural characterization. Conclusion References Submit a manuscript

  • Electronic and thermal sequential transport in metallic and superconducting two-junction arraysT. K¨uhn NanoScience Center and Department of Physics, University of Jyv¨askyl¨a, P.O. Box 35 (YFL), FIN-40014 University of Jyv¨askyl¨a, Finland G. S. Paraoanu∗ Low Temperature Laboratory, School of Science and Technology, Aalto University, P. O. Box 15100, FI-00076 AALTO, Finland.

    Theoretical Physics Letters HOME JOURNALS PRICING AND PLANS SUBMIT Locked Tphysicsletters/6981/11/1490/466489.476tpl/Electronic and thermal sequential transport in metallic and superconducting two-junction arrays Citation (0) Tuesday, March 5, 2024 at 7:00:00 PM UTC Request Open Apply Now Article Rating by Publisher 10 T. Physics Article Rating by Authors 9 10.1490/466489.476tpl Electronic and thermal sequential transport in metallic and superconducting two-junction arrays T. K¨uhn NanoScience Center and Department of Physics, University of Jyv¨askyl¨a, P.O. Box 35 (YFL), FIN-40014 University of Jyv¨askyl¨a, Finland G. S. Paraoanu∗ Low Temperature Laboratory, School of Science and Technology, Aalto University, P. O. Box 15100, FI-00076 AALTO, Finland. Theoretical Physics Letters 2023 ° 02(05) ° 11-07 https://www.wikipt.org/tphysicsletters DOI: 10.1490/466489.476tpl TOA Abstract Introduction Conclusion Acknowledgments We would like to thank J. P. Pekola and I. Maasilta for useful comments on the manuscript. T. K. would like to acknowledge financial support from the Emil Aaltonen foundation. The contribution of G.S.P. was supported by the Academy of Finland (Acad. Res. Fellowship 00857, and projects 129896, 118122, and 135135). Unlock Only Changeover the Schrödinger Equation This option will drive you towards only the selected publication. If you want to save money then choose the full access plan from the right side. Unlock all Get access to entire database This option will unlock the entire database of us to you without any limitations for a specific time period. This offer is limited to 100000 clients if you make delay further, the offer slots will be booked soon. Afterwards, the prices will be 50% hiked. Buy Unlock us Newsletters Abstract The description of transport phenomena in devices consisting of arrays of tunnel junctions, and the experimental confirmation of these predictions is one of the great successes of mesoscopic physics. The aim of this paper is to give a self-consistent review of sequential transport processes in such devices, based on the so-called ”orthodox” model. We calculate numerically the current-voltage (I–V ) curves, the conductance versus bias voltage (G–V ) curves, and the associated thermal transport in symmetric and asymmetric two-junction arrays such as Coulomb-blockade thermometers (CBTs), superconducting-insulator-normal-insulator-superconducting (SINIS) structures, and superconducting single-electron transistors (SETs). We investigate the behavior of these systems at the singularity-matching bias points, the dependence of microrefrigeration effects on the charging energy of the island, and the effect of a finite superconducting gap on Coulomb-blockade thermometry. Introduction Quasiparticle transport processes across metallic junctions play a fundamental role in the functioning of many devices used nowadays in mesoscopic physics. One such device is the single electron transistor (SET), invented and fabricated almost two decades ago [1], which has found remarkable applications as ultrasensitive charge detector [2] and as amplifier operating at the quantum limit [3]. In the emerging field of quantum computing the superconducting SET has been proposed and used as a quantum bit [4]. With advancements in lithography techniques, this device can be fully suspended [5], thus providing a new avenue for nanoelectromechanics. Similar devices are currently used (in practice arrays with several junctions turn out to provide a larger signal-to-noise ratio) as Coulomb blockade (CBT) primary thermometers [6]. Also, superconducting double-junction systems with appropriate bias can be operated as microcoolers [7]. The functioning of these three classes of devices is based on the interplay between two out of the three relevant energy scales: the superconducting gap, the charging energy, and the temperature. For example, in the case of microcoolers, the temperature and the gap are finite, and the charging energy is typically zero. A natural question to raise is then what happens if the charging energy is no longer negligible, for example if one wishes to miniaturize further these devices. In contradistinction, for CBTs the charging energy and the temperature are important, and the superconducting gap is a nuisance. A solution is to suppress the gap by using external magnetic fields, an idea which makes these temperature sensors more bulky and risky to use near magnetic-field sensitive components. Therefore, understanding the corrections introduced by the superconducting gap could provide an interesting alternative route, although, with present technology, the level of control required of the gap value could be very difficult to achieve. Finally, electrometers and superconducting SETs are operated at low temperatures, with the charging energy and the gap being dominant. However, large charging energies are not always easy to obtain for some materials due to technological limitations, while achieving effective very low electronic temperatures is limited by various nonequilibrium processes. In this article we present a unified treatment of these three devices by solving the transport problem in the most general case, when all three energy scales are present. Our goal is to give an eye guidance for the experimentalist working in the field, showing what are the main characteristics visible in the I–V s and G–V s, resulting from sequential tunneling. Both the electrical and the thermal transport are calculated in the framework of a generalized so-called ”orthodox” theory, which includes the superconducting gap. For completeness, we offer a self-consistent review of this theory, which has become nowadays the standard model for describing sequential quasiparticle transport processes in these devices. We ignore Josephson effects which, for the purpose of this analysis just add certain well-known Conclusion We have presented the theory of tunneling in metallic and superconducting two-junction arrays such as single electron transistors, together with a number of applications. All three energy scales, the charging energy, the superconducting gap, and the temperature, are considered and their role is thoroughly discussed. For example, we examined how a finite superconducting gap affects the Coulomb-blockade based thermometry, the effect of singularity-matching peaks in the current-voltage and conductance-voltage characteristics of superconducting single-electron transistors, and we looked at the effect of charging energy in cooling devices. With the development of the field of nanotechnology, such devices could emerge as very useful tools for high-precision measurements of nano-structured materials and objects at low temperatures. TOC (TphysicsLetters) TOC (TphysicsLetters) The Nature of the 1 MeV-Gamma Quantum in a Classic Interpretation of the Quantum Nebular spectra from Type Ia supernov Physics Tomorrow TOC HIGHLIGHTS 2023 TOC HIGHLIGHTS 2023 Theoretical Physics Letters Physics Tomorrow ZZ Ceti stars of the southern ecliptic hemisphere re-observed by TESS ZZ Ceti stars of the southern ecliptic hemisphere re-observed by TESS Physics Tomorrow [1] D. V. Averin and K. K. Likharev, J. Low Temp. Phys. 62, 345 (1986); T. A. Fulton and G. J. Dolan, Phys. Rev. Lett. 59, 109 (1987). [2] R. J. Schoelkopf, P. Wahlgren, A. A. Kozhevnikov, P. Delsing, and D. E. Prober, Science 280, 1238 (1998); M. A. Sillanp¨a¨ , L. Roschier, and P. J. Hakonen, Phys. Rev. Lett. 93, 066805 (2004). [3] M. H. Devoret, R. J. Schoelkopf, Nature 406, 1039 (2000). [4] Y. Nakamura, Y. A. Pashkin, and J. S. Tsai, Nature, 398, 786 (1999); Yu. Makhlin, G. Sch¨on, and A. Shnirman, Rev. Mod. Phys. 73, 357 (2001); D. Vion et. al., Science 296, 886 (2002); Y. Nakamura, Yu. A. Paskin, T. Yamamoto, and J. S. Tsai, Phys. Rev. Lett. 88, 047901 (2002); Yu. A. Paskin et. al., Nature 421, 823 (2003); T. Yamamoto et. al., Nature 425, 941 (2003); T. Duty, D. Gunnarsson, K. Bladh, and P. Delsing, Phys. Rev. B 69 132504 (2004); J.Q. You and F. Nori, Physics Today 58, 42 (2005); G. S. Paraoanu, Phys. Rev. B 74, 140504(R) (2006). G. S. Paraoanu, Phys. Rev. Lett. 97, 180406 (2006); J. Li, K. Chalapat, and G. S. Paraoanu, Phys. Rev. B 78, 064503 (2008); J. Li and G.S. Paraoanu, New J. Phys. 11, 113020 (2009). [5] G. S. Paraoanu and A. M. Halvari, Appl. Phys. Lett. 86, 093101 (2005); T. F. Li et. al., Appl. Phys. Lett. 91, 033107 (2007). [6] J. P. Pekola, K. P. Hirvi, J. P. Kauppinen, and M. A. Paalanen, Phys. Rev. Lett. 73, 2903 (1994); K. P. Hirvi, J. P. Kauppinen, A. N. Korotkov, M. A. Paalanen, and J. P. Pekola, Appl. Phys. Lett. 67, 2096 (1995); J. P. Kauppinen and J. P. Pekola, Phys. Rev. Lett. 77, 3889 (1996); Sh. Farhangfar, K. P. Hirvi, J.P. Kauppinen, J. P. Pekola, J. J. Toppari, D. V. Averin, and A. N. Korotkov, J. Low Temp. Phys. 108, 191 (1997); J. P. Pekola, J. J. Toppari, J. P. Kauppinen, K. M. Kinnunen, A. J. Manninen, and A. G. M. Jansen, J. Appl. Phys. 83, 5582 (1998); J. P. Kauppinen, K. T. Loberg, A. J. Manninen, J. P. Pekola, and R. V. Voutilainen, Rev. Sci. Instrum. 69, 4166 (1998). [7] M. M. Leivo, J. P. Pekola, and D. V. Averin, Appl. Phys. Lett. 68, 1996 (1996); J. P. Pekola, F. Giazotto, and O.-P. Saira, Phys. Rev. Lett. 98, 037201 (2007); O.-P. Saira, M. Meschke, F. Giazotto, A. M. Savin, M. Mottonen, J. P. Pekola, Phys. Rev. Lett. 99, 027203 (2007). [8] A. B. Zorin, S. V. Lotkhov, H. Zangerle, and J. Niemeyer, J. Appl. Phys. 88, 2665 (2000); R. Dolata, H. Sch Abstract Introduction Conclusion References All Products Quick View Newly listed Tphysletters A Unifying Bag Model of Composite Fermionic Structures in a Cold Genesis Theory Regular Price $700.00 Sale Price $400.00 Excluding Sales Tax Quick View TphysicsLetters Detection of the large-scale tidal field with galaxy multiplet alignment in the Regular Price $1,900.00 Sale Price $950.00 Excluding Sales Tax Quick View Newly listed Tphysletters Violation of γ in Brans-Dicke gravity Regular Price $1,000.00 Sale Price $600.00 Excluding Sales Tax Quick View Astrophysics Observations and detectability of young Suns’ flaring and CME activity in optica Regular Price $1,000.00 Sale Price $450.00 Excluding Sales Tax Quick View TphysicsLetters Tunable structure-activity correlations of molybdenum dichalcogenides (MoX2; X=S Regular Price $2,000.00 Sale Price $400.00 Excluding Sales Tax Quick View New Thphysletters Bayesian and frequentist investigation of prior effects in EFTofLSS analyses of Regular Price $3,000.00 Sale Price $370.00 Excluding Sales Tax Quick View New Thphysletters A search for faint resolved galaxies beyond the Milky Way in DES Year 6: A new f Regular Price $1,900.00 Sale Price $750.00 Excluding Sales Tax Quick View New X-ray polarization properties of partially ionized equatorial obscurers around a Regular Price $800.00 Sale Price $350.00 Excluding Sales Tax Quick View New Unravelling multi-temperature dust populations in the dwarf galaxy Holmberg II Regular Price $1,200.00 Sale Price $400.00 Excluding Sales Tax Quick View New SpookyNet: Advancement in Quantum System Analysis through Convolutional Neural N Regular Price $1,500.00 Sale Price $500.00 Excluding Sales Tax Quick View New Rapid neutron star cooling triggered by accumulated dark matter Regular Price $1,500.00 Sale Price $500.00 Excluding Sales Tax Quick View Newly listed Tphysletters Searching for Radio Outflows from M31* with VLBI Observations Price $300.00 Excluding Sales Tax Quick View New Thphysletters Measurement of the scaling slope of compressible magnetohydrodynamic turbulence Regular Price $680.00 Sale Price $612.00 Excluding Sales Tax Quick View MAKE OPEN ACCESS New method to revisit the gravitational lensing analysis of the Bullet Cluster u Price $1,030.00 Excluding Sales Tax Quick View New Thphysletters New method to revisit the gravitational lensing analysis of the Bullet Cluster u Regular Price $599.00 Sale Price $359.40 Excluding Sales Tax Quick View New Nebular spectra from Type Ia supernova explosion models compared to JWST observa Regular Price $503.00 Sale Price $271.62 Excluding Sales Tax Quick View New Thphysletters The Nature of the 1 MeV-Gamma quantum in a Classic Interpretation of the Quantum Price $399.00 Excluding Sales Tax Quick View Exceptional Classifications of Non-Hermitian Systems Price $399.00 Excluding Sales Tax Quick View New Thphysletters On the occurrence of stellar fission in binary-driven hypernovae Price $399.00 Excluding Sales Tax Quick View New ApplSciLettersA AC frequency influence on pump temperature Price $399.00 Excluding Sales Tax Quick View New ApplSciLett. Perturbative aspects of mass dimension one fermions non-minimally coupled to ele Regular Price $399.00 Sale Price $319.20 Excluding Sales Tax Quick View ZZ Ceti stars of the southern ecliptic hemisphere re-observed by TESS Price $200.00 Excluding Sales Tax Quick View New Thphysletters Magnetic reconnection as an erosion mechanism for magnetic switchbacks Price $490.00 Excluding Sales Tax Quick View New Thphysletters Calculation of the Hubble Constant, the Minimum Mass, and the Proton Charge Radi Price $499.00 Excluding Sales Tax Featured Changeover the Schrödinger Equation $100.00 Price Excluding Sales Tax View Details

  • Einstein’s General Theory of Relativity at the Writing TableDr. Yuriy N. Zayko Department of Applied Informatics, Faculty of Public Administration Russian Presidential Academy of National Economy and Public Administration Stolypin Volga Region Institute, Russia, Saratov zyrnick@rambler.ru

    Theoretical Physics Letters HOME JOURNALS PRICING AND PLANS SUBMIT © PTL OPEN Citation (1) zyrnick@rambler.ru Wednesday, May 15, 2019 at 5:00:00 PM UTC Apply Now Einstein’s General Theory of Relativity at the Writing Table Dr. Yuriy N. Zayko Department of Applied Informatics, Faculty of Public Administration Russian Presidential Academy of National Economy and Public Administration Stolypin Volga Region Institute, Russia, Saratov zyrnick@rambler.ru ! Widget Didn’t Load Check your internet and refresh this page. If that doesn’t work, contact us. TOA Abstract Introduction Conclusion Unlock Only Changeover the Schrödinger Equation This option will drive you towards only the selected publication. If you want to save money then choose the full access plan from the right side. Unlock all Get access to entire database This option will unlock the entire database of us to you without any limitations for a specific time period. This offer is limited to 100000 clients if you make delay further, the offer slots will be booked soon. Afterwards, the prices will be 50% hiked. Buy Unlock us Newsletters ! Widget Didn’t Load Check your internet and refresh this page. If that doesn’t work, contact us. TOC (TphysicsLetters) TOC (TphysicsLetters) The Nature of the 1 MeV-Gamma Quantum in a Classic Interpretation of the Quantum Nebular spectra from Type Ia supernov Physics Tomorrow TOC HIGHLIGHTS 2023 TOC HIGHLIGHTS 2023 Theoretical Physics Letters Physics Tomorrow ZZ Ceti stars of the southern ecliptic hemisphere re-observed by TESS ZZ Ceti stars of the southern ecliptic hemisphere re-observed by TESS Physics Tomorrow Abstract Introduction Conclusion References All Products Quick View Newly listed Tphysletters A Unifying Bag Model of Composite Fermionic Structures in a Cold Genesis Theory Regular Price $700.00 Sale Price $400.00 Excluding Sales Tax Quick View TphysicsLetters Detection of the large-scale tidal field with galaxy multiplet alignment in the Regular Price $1,900.00 Sale Price $950.00 Excluding Sales Tax Quick View Newly listed Tphysletters Violation of γ in Brans-Dicke gravity Regular Price $1,000.00 Sale Price $600.00 Excluding Sales Tax Quick View Astrophysics Observations and detectability of young Suns’ flaring and CME activity in optica Regular Price $1,000.00 Sale Price $450.00 Excluding Sales Tax Quick View TphysicsLetters Tunable structure-activity correlations of molybdenum dichalcogenides (MoX2; X=S Regular Price $2,000.00 Sale Price $400.00 Excluding Sales Tax Quick View New Thphysletters Bayesian and frequentist investigation of prior effects in EFTofLSS analyses of Regular Price $3,000.00 Sale Price $370.00 Excluding Sales Tax Quick View New Thphysletters A search for faint resolved galaxies beyond the Milky Way in DES Year 6: A new f Regular Price $1,900.00 Sale Price $750.00 Excluding Sales Tax Quick View New X-ray polarization properties of partially ionized equatorial obscurers around a Regular Price $800.00 Sale Price $350.00 Excluding Sales Tax Quick View New Unravelling multi-temperature dust populations in the dwarf galaxy Holmberg II Regular Price $1,200.00 Sale Price $400.00 Excluding Sales Tax Quick View New SpookyNet: Advancement in Quantum System Analysis through Convolutional Neural N Regular Price $1,500.00 Sale Price $500.00 Excluding Sales Tax Quick View New Rapid neutron star cooling triggered by accumulated dark matter Regular Price $1,500.00 Sale Price $500.00 Excluding Sales Tax Quick View Newly listed Tphysletters Searching for Radio Outflows from M31* with VLBI Observations Price $300.00 Excluding Sales Tax Quick View New Thphysletters Measurement of the scaling slope of compressible magnetohydrodynamic turbulence Regular Price $680.00 Sale Price $612.00 Excluding Sales Tax Quick View MAKE OPEN ACCESS New method to revisit the gravitational lensing analysis of the Bullet Cluster u Price $1,030.00 Excluding Sales Tax Quick View New Thphysletters New method to revisit the gravitational lensing analysis of the Bullet Cluster u Regular Price $599.00 Sale Price $359.40 Excluding Sales Tax Quick View New Nebular spectra from Type Ia supernova explosion models compared to JWST observa Regular Price $503.00 Sale Price $271.62 Excluding Sales Tax Quick View New Thphysletters The Nature of the 1 MeV-Gamma quantum in a Classic Interpretation of the Quantum Price $399.00 Excluding Sales Tax Quick View Exceptional Classifications of Non-Hermitian Systems Price $399.00 Excluding Sales Tax Quick View New Thphysletters On the occurrence of stellar fission in binary-driven hypernovae Price $399.00 Excluding Sales Tax Quick View New ApplSciLettersA AC frequency influence on pump temperature Price $399.00 Excluding Sales Tax Quick View New ApplSciLett. Perturbative aspects of mass dimension one fermions non-minimally coupled to ele Regular Price $399.00 Sale Price $319.20 Excluding Sales Tax Quick View ZZ Ceti stars of the southern ecliptic hemisphere re-observed by TESS Price $200.00 Excluding Sales Tax Quick View New Thphysletters Magnetic reconnection as an erosion mechanism for magnetic switchbacks Price $490.00 Excluding Sales Tax Quick View New Thphysletters Calculation of the Hubble Constant, the Minimum Mass, and the Proton Charge Radi Price $499.00 Excluding Sales Tax Featured Changeover the Schrödinger Equation $100.00 Price Excluding Sales Tax View Details

  • ZZ Ceti stars of the southern ecliptic hemisphere re-observed by TESSZsófia Bognár

    Theoretical Physics Letters HOME JOURNALS PRICING AND PLANS SUBMIT PTL PREMIUM Tphysicsletters/0687/1296/ZZ Ceti stars of the southern ecliptic hemisphere re-observed by TESS Citation (0) Saturday, May 13, 2023 at 6:45:00 AM UTC Request Open Apply Now Locked DOI: 10.1490/369888.0687tpl ZZ Ceti stars of the southern ecliptic hemisphere re-observed by TESS Zsófia Bognár Theoretical Physics Letters 2023 ° 13(05) ° 0697-1296 https://www.wikipt.org/tphysicsletters DOI: 10.1490/369888.0687tpl TOA Abstract Introduction Conclusion Unlock Only Changeover the Schrödinger Equation This option will drive you towards only the selected publication. If you want to save money then choose the full access plan from the right side. Unlock all Get access to entire database This option will unlock the entire database of us to you without any limitations for a specific time period. This offer is limited to 100000 clients if you make delay further, the offer slots will be booked soon. Afterwards, the prices will be 50% hiked. Buy Unlock us Newsletters Abstract In 2020, a publication presented the first-light results for 18 known ZZ Ceti stars observed by the TESS space telescope during the first survey observations of the southern ecliptic hemisphere. However, in the meantime, new measurements have become available from this field, in many cases with the new, 20s ultrashort cadence mode. Aims. We investigated the similarities and differences in the pulsational behaviour of the observed stars between the two observational seasons and searched for new pulsation modes for asteroseismology. Methods. We performed a Fourier analysis of the light curves using the standard pre-whitening process and compared the results with frequencies obtained from the earlier data. Utilising the 2018 version of the White Dwarf Evolution Code, we also performed an asteroseismic analysis of the different stars. We searched for models with seismic distances in the vicinity of the Gaia geometric distances. Results. We detected several new possible pulsation modes of the studied pulsators. In the case of HE 0532-5605, we found a similar brightening phase to the one presented in the 2020 first-light paper, which means this phenomenon is recurring. Therefore, HE 0532- 5605 appears to be a new outbursting DAV star. We also detected a lower-amplitude brightening phase in the star WD J0925+0509. However, this case has proven to be the result of the passage of a Solar System object in the foreground. We accept asteroseismic model solutions for six stars. ZZ Ceti or DAV stars are short-period (P ∼ 100 − 1500 s), low-amplitude (A ∼ 0.1%) variables, which means precise and short-exposure-time measurements are required both from the ground and space in order to study their pulsations. Their atmospheres are dominated by hydrogen, and they form the most populous group of pulsating white dwarf stars, lying in the 10 500– 13 000 K effective temperature range. Their pulsation modes are low-spherical-degree (ℓ = 1 and 2), and low-to-mid radialorder g-modes. The κ − γ mechanism (Dolez & Vauclair 1981; Winget et al. 1982) in combination with the convective driving mechanism (Brickhill 1991; Goldreich & Wu 1999) is responsible for the excitation of the observed pulsations. Despite the relatively narrow instability strip of the DAV stars, they can show a large variety of pulsational properties, evolving from the hot (blue) to the cool (red) edge of the instability domain. Hotter DAVs show fewer and lower-amplitude pulsation modes than the cooler ones. Furthermore, in this latter case, above about 800 s in period, we usually do not detect one single peak at a given frequency in the Fourier transform of the light curve, but a large number of peaks under a broad envelope, which is reminiscent of stochastically driven oscillations. We refer the reader to Hermes et al. (2017) for a detailed description of both the DAV instability strip and this interesting phenomenon based on observations with the Kepler space telescope. For reviews of the theoretical and observational aspects of studies of white dwarf pulsators, we also recommend the papers of Winget & Kepler (2008), Fontaine & Brassard (2008), Althaus et al. (2010), Córsico et al. (2019), and Córsico (2020). We also mention the so-called outburst phenomena in cool DAV stars, which appears as an increase in the stellar flux of ZZ Ceti stars close to the red edge of the instability strip. These outburst events were discovered using the measurements of the Kepler space telescope; see the papers of Keaton Bell and his collaborators: Bell et al. (2015, 2016, 2017), and also Hermes et al. (2015). Such phenomena suggest that the average brightness of the star increases relatively quickly (in about 1 hour) and by at least several per cent, and remains in this state for several hours or even longer, sometimes for even more than 1 day. After that, the stellar brightness decreases to the initial value; the outburst event repeats after several days or weeks. The duration and occurrence of these events is irregular and unpredictable. Bell et al. (2017) discuss a possible explanation for the outbursts: non-linear mode coupling, which can transfer energy from a driven parent mode into two daughter modes. In this case, these otherwise damped daughter modes will deposit the additional energy at the base of the convection zone, and we observe the resulting surface heating of the star. This pulsational energy-transfer mechanism could explain the observed location of the cool edge of the ZZ Ceti instability strip, which should be much cooler according to theoretical calculations. However, Montgomery et al. (2020) raised another possibility, namely that phase shifts of the travelling waves reflected from the outer turning point being close to the convection zone could also be relevant in explaining the outburst phenomenon. This paper focuses on the study of ZZ Ceti stars observed by the Transiting Exoplanet Survey Satellite (TESS; Ricker et al. 2015). TESS was launched on 18 April 2018, and during its two-year primary mission, it provided 30 minute (long-)cadence full-frame images from almost the entire sky, and 120 second (short-)cadence observations on selected targets. The main goal of the mission is to find exoplanets at bright nearby stars with the transit method, but the time sampling of the observations also allows us to examine the pulsations of stars in the observed fields. Due to their short periods, only the short cadence mode is suitable for studying the light variations of compact pulsators. The first-light papers of the TESS Asteroseismic Science Consortium (TASC) Compact Pulsators Working Group (WG#8), presented for example by Bell et al. (2019), Charpinet et al. (2019), and Bognár et al. (2020), clearly demonstrate the suitability of TESS measurements for compact pulsators. Moreover, TESS observations have significantly raised (by about 20 per cent) the number of known DAV stars (Romero et al. 2022). Fortunately, the Extended Mission was approved for 2020– 2022, with some modifications, for example in the cadence of\ the observations. The full-frame image cadence was reduced to 10 minutes, and a new, 20-second ultrashort cadence mode was implemented. The latter in particular was a welcome addition given the short periods seen in compact pulsators. This paper is the continuation of our work published in 2020 (Bognár et al. 2020, hereafter P01). We detail the main goals of the present work and some points about the light curve reduction process in Sect. 2. Section 3 presents the results of the lightcurve analyses, while Sect. 4 summarises our asteroseismic investigations. Finally, the summary and conclusions are presented in Sect. 5. We focused on the results of the ultrashort cadence (20 s) mode TESS observations of nine white dwarf stars known as ZZ Ceti variables. These stars were presented in P01, but in that case the shortest cadence mode available was only 120 s. The new TESS observations allow us to determine the pulsation modes without the Nyquist ambiguities of the 120 s measurements, and to compare the frequency contents between the different observational cycles. We note that we investigated the measurements on 18 previously known ZZ Ceti stars in P01, but more than half of them did not show periodic light variations in the TESS observations. We explain this as mainly resulting from the faintness of these targets, in combination with the crowding of the large TESS pixels. Considering the new observations presented in this paper, we find significant pulsation frequencies in seven stars. Additionally, we detect one-one brightening episodes in the light curves of two targets. In the case of the first, HE 0532-5605, we detect a similar brightening phase to that detected earlier and described in P01, that is, the phenomenon is recurring, implying that HE 0532-5605 is most probably a new outbursting ZZ Ceti star. However, the observed brightening of the other star, WD J0925+0509, was extrinsic, and caused by a passing minor planet crossing the photometric aperture of the star in the TESS images. Using the effective temperature and surface gravity values for HE 0532-5605 provided in Bognár & Sódor (2016) (11 510 K and 8.42 dex, respectively); and placing it on the Teff– log g diagram presented for example by Hermes et al. (2017) (their Fig. 3), we see that the star can be found near the red edge of the empirical ZZ Ceti instability strip. In this respect, HE 0532-5605 is similar to other ZZ Cetis, showing outbursts. Below, we briefly summarise our results for the different stars showing pulsations based on the new ultrashort cadence TESS observations: Ross 548: We can clearly detect the four highest-amplitude frequencies using the ultrashort cadence data, without the Nyquist alias ambiguities of the 120 s cadence observations. EC 23487-2424: The dominant frequency is different from the one detected in the previous TESS data. Some of the peaks seem to be unstable in amplitude, frequency, or phase, producing additional peaks around them. BPM 31594: We find almost all the frequencies detected previously, as well as several additional frequencies. BPM 30551: Only new frequencies are detected, although one of them very near to another detected in the first TESS data set in P01. MCT 0145-2211: Only new frequencies are detected, none of the old ones appeared in the new TESS data, almost as if we observed a different star. L 19-2: One already known frequency, and four additional frequencies in the 20 s cadence data. HS 1013+0321: The first TESS data set did not show pulsational light variations, while in the new TESS data, we detect all three frequencies reported earlier in the literature. We also detect a new peak, which appears to be the result of rotational frequency splitting. The newly detected frequencies impose stronger constraints on asteroseismological modelling. We performed a preliminary asteroseismic analysis of the stars that show pulsational light variations, as the ultimate goal of our efforts to detect as many pulsation modes as we possibly can is to learn more about the internal structure of the target stars and their non-pulsating counterparts, and about the dynamical processes operating in them. We succeeded in finding models with parameters in the vicinity of the Gaia geometric distances. Here, we demonstrate the high value of the new, ultrashort cadence mode observations in studying white dwarf variables, and the continuation of these measurements could be extremely valuable to the white dwarf community. TOC (TphysicsLetters) TOC (TphysicsLetters) The Nature of the 1 MeV-Gamma Quantum in a Classic Interpretation of the Quantum Nebular spectra from Type Ia supernov Physics Tomorrow TOC HIGHLIGHTS 2023 TOC HIGHLIGHTS 2023 Theoretical Physics Letters Physics Tomorrow ZZ Ceti stars of the southern ecliptic hemisphere re-observed by TESS ZZ Ceti stars of the southern ecliptic hemisphere re-observed by TESS Physics Tomorrow Althaus, L. G., Córsico, A. H., Isern, J., & García-Berro, E. 2010, A&A Rev., 18, 471 Bédard, A., Bergeron, P., Brassard, P., & Fontaine, G. 2020, ApJ, 901, 93 Bell, K. J., Córsico, A. H., Bischoff-Kim, A., et al. 2019, A&A, 632, A42 Bell, K. J., Hermes, J. J., Bischoff-Kim, A., et al. 2015, ApJ, 809, 14 Bell, K. J., Hermes, J. J., Montgomery, M. H., et al. 2016, ApJ, 829, 82 Bell, K. J., Hermes, J. J., Montgomery, M. H., et al. 2017, in Astronomical Society of the Pacific Conference Series, Vol. 509, 20th European White Dwarf Workshop, ed. P.-E. Tremblay, B. Gaensicke, & T. Marsh, 303 Bischoff-Kim, A. & Montgomery, M. H. 2018, AJ, 155, 187 Bognár, Z., Kalup, C., & Sódor, Á. 2021, A&A, 651, A14 Bognár, Z., Kawaler, S. D., Bell, K. J., et al. 2020, A&A, 638, A82 Bognár, Z. & Sódor, A. 2016, Information Bulletin on Variable Stars, 6184, 1 Bohm, K. H. & Cassinelli, J. 1971, A&A, 12, 21 Brickhill, A. J. 1991, MNRAS, 251, 673 Charpinet, S., Brassard, P., Fontaine, G., et al. 2019, A&A, 632, A90 Córsico, A. H. 2020, Frontiers in Astronomy and Space Sciences, 7, 47 Córsico, A. H., Althaus, L. G., Miller Bertolami, M. M., & Kepler, S. O. 2019, A&A Rev., 27, 7 Dolez, N. & Vauclair, G. 1981, A&A, 102, 375 Fontaine, G. & Brassard, P. 2008, PASP, 120, 1043 Gaia Collaboration, Brown, A. G. A., Vallenari, A., et al. 2021, A&A, 649, A1 Giammichele, N., Fontaine, G., Bergeron, P., et al. 2015, ApJ, 815, 56 Gianninas, A., Bergeron, P., & Ruiz, M. T. 2011, ApJ, 743, 138 Goldreich, P. & Wu, Y. 1999, ApJ, 511, 904 Hermes, J. J., Gänsicke, B. T., Kawaler, S. D., et al. 2017, ApJS, 232, 23 Hermes, J. J., Montgomery, M. H., Bell, K. J., et al. 2015, ApJ, 810, L5 Jenkins, J. M., Twicken, J. D., McCauliff, S., et al. 2016, in Proc. SPIE, Vol. 9913, Software and Cyberinfrastructure for Astronomy IV, 99133E Kalup, C., . Bognár, Z., & Sódor, Á. 2021, Acta Astron., 71, 281 Kim, A. 2007, PhD thesis, The University of Texas at Austin Montgomery, M. H., Hermes, J. J., Winget, D. E., Dunlap, B. H., & Bell, K. J. 2020, ApJ, 890, 11 Mukadam, A. S., Mullally, F., Nather, R. E., et al. 2004, ApJ, 607, 982 Nather, R. E., Winget, D. E., Clemens, J. C., Hansen, C. J., & Hine, B. P. 1990, ApJ, 361, 309 Paxton, B., Bildsten, L., Dotter, A., et al. 2011, ApJS, 192, 3 Ricker, G. R., Winn, J. N., Vanderspek, R., et al. 2015, Journal of Astronomical Telescopes, Instruments, and Systems, 1, 014003 Romero, A. D., da Rosa, G. O., Kepler, S. O., et al. 2023, MNRAS, 518, 1448 Romero, A. D., Kepler, S. O., Hermes, J. J., et al. 2022, MNRAS, 511, 1574 Sodor, A. 2012, Konkoly Observatory Occasional Technical Notes, 15, 1 Stobie, R. S., Chen, A., O’Donoghue, D., & Kilkenny, D. 1993, MNRAS, 263, L13 Tremblay, P. E., Bergeron, P., & Gianninas, A. 2011, ApJ, 730, 128 Tremblay, P.-E., Ludwig, H.-G., Freytag, B., et al. 2015, ApJ, 799, 142 Tremblay, P. E., Ludwig, H. G., Steffen, M., & Freytag, B. 2013, A&A, 559, A104 Unno, W., Osaki, Y., Ando, H., Saio, H., & Shibahashi, H. 1989, Nonradial oscillations of stars Winget, D. E. & Kepler, S. O. 2008, ARA&A, 46, 157 Winget, D. E., van Horn, H. M., Tassoul, M., et al. 1982, ApJ, 252, L65 Yeates, C. M., Clemens, J. C., Thompson, S. E., & Mullally, F. 2005, ApJ, 635, 1239 Zacharias, N., Finch, C. T., Girard, T. M., et al. 2012, VizieR Online Data Catalog, I/322A Zong, W., Charpinet, S., Vauclair, G., Giammichele, N., & Van Grootel, V. 2016, A&A, 585, A22 Abstract Introduction Conclusion References All Products Quick View Newly listed Tphysletters A Unifying Bag Model of Composite Fermionic Structures in a Cold Genesis Theory Regular Price $700.00 Sale Price $400.00 Excluding Sales Tax Quick View TphysicsLetters Detection of the large-scale tidal field with galaxy multiplet alignment in the Regular Price $1,900.00 Sale Price $950.00 Excluding Sales Tax Quick View Newly listed Tphysletters Violation of γ in Brans-Dicke gravity Regular Price $1,000.00 Sale Price $600.00 Excluding Sales Tax Quick View Astrophysics Observations and detectability of young Suns’ flaring and CME activity in optica Regular Price $1,000.00 Sale Price $450.00 Excluding Sales Tax Quick View TphysicsLetters Tunable structure-activity correlations of molybdenum dichalcogenides (MoX2; X=S Regular Price $2,000.00 Sale Price $400.00 Excluding Sales Tax Quick View New Thphysletters Bayesian and frequentist investigation of prior effects in EFTofLSS analyses of Regular Price $3,000.00 Sale Price $370.00 Excluding Sales Tax Quick View New Thphysletters A search for faint resolved galaxies beyond the Milky Way in DES Year 6: A new f Regular Price $1,900.00 Sale Price $750.00 Excluding Sales Tax Quick View New X-ray polarization properties of partially ionized equatorial obscurers around a Regular Price $800.00 Sale Price $350.00 Excluding Sales Tax Quick View New Unravelling multi-temperature dust populations in the dwarf galaxy Holmberg II Regular Price $1,200.00 Sale Price $400.00 Excluding Sales Tax Quick View New SpookyNet: Advancement in Quantum System Analysis through Convolutional Neural N Regular Price $1,500.00 Sale Price $500.00 Excluding Sales Tax Quick View New Rapid neutron star cooling triggered by accumulated dark matter Regular Price $1,500.00 Sale Price $500.00 Excluding Sales Tax Quick View Newly listed Tphysletters Searching for Radio Outflows from M31* with VLBI Observations Price $300.00 Excluding Sales Tax Quick View New Thphysletters Measurement of the scaling slope of compressible magnetohydrodynamic turbulence Regular Price $680.00 Sale Price $612.00 Excluding Sales Tax Quick View MAKE OPEN ACCESS New method to revisit the gravitational lensing analysis of the Bullet Cluster u Price $1,030.00 Excluding Sales Tax Quick View New Thphysletters New method to revisit the gravitational lensing analysis of the Bullet Cluster u Regular Price $599.00 Sale Price $359.40 Excluding Sales Tax Quick View New Nebular spectra from Type Ia supernova explosion models compared to JWST observa Regular Price $503.00 Sale Price $271.62 Excluding Sales Tax Quick View New Thphysletters The Nature of the 1 MeV-Gamma quantum in a Classic Interpretation of the Quantum Price $399.00 Excluding Sales Tax Quick View Exceptional Classifications of Non-Hermitian Systems Price $399.00 Excluding Sales Tax Quick View New Thphysletters On the occurrence of stellar fission in binary-driven hypernovae Price $399.00 Excluding Sales Tax Quick View New ApplSciLettersA AC frequency influence on pump temperature Price $399.00 Excluding Sales Tax Quick View New ApplSciLett. Perturbative aspects of mass dimension one fermions non-minimally coupled to ele Regular Price $399.00 Sale Price $319.20 Excluding Sales Tax Quick View ZZ Ceti stars of the southern ecliptic hemisphere re-observed by TESS Price $200.00 Excluding Sales Tax Quick View New Thphysletters Magnetic reconnection as an erosion mechanism for magnetic switchbacks Price $490.00 Excluding Sales Tax Quick View New Thphysletters Calculation of the Hubble Constant, the Minimum Mass, and the Proton Charge Radi Price $499.00 Excluding Sales Tax Featured Changeover the Schrödinger Equation $100.00 Price Excluding Sales Tax View Details

  • Synopset: multiscale visual abstraction set for explanatory analysis of dna nanotechnology simulations

    PTL NANO ||Synopset: multiscale visual abstraction set for explanatory analysis of dna nanotechnology simulations PTL NANO HOME JOURNALS PRICING AND PLANS SUBMIT Locked Heading 4 Sunday, May 29, 2022 at 9:00:00 AM UTC I'm a paragraph. Click here to add your own text and edit me. It's easy. Apply Now Heading 6 Heading 6 BACK TO TOP Synopset: multiscale visual abstraction set for explanatory analysis of dna nanotechnology simulations Deng Luo1 PTL NANO VOLUME 01, ISSUE02 DOI- REGISTERING Acknolowdgement NA Keyword Highlighted Application-Motivated Visualization, Data Abstractions & Types, Communication/Presentation, Storytelling, Temporal Data Unlock Only Read-only this publication This option will drive you towards only the selected publication. If you want to save money then choose the full access plan from the right side. Buy Unlock all Get access to entire database This option will unlock the entire database of us to you without any limitations for a specific time period. This offer is limited to 100000 clients if you make delay further, the offer slots will be booked soon. Afterwards, the prices will be 50% hiked. Unlock us Quick View Newly listed Tphysletters A Unifying Bag Model of Composite Fermionic Structures in a Cold Genesis Theory Regular Price $700.00 Sale Price $400.00 Excluding Sales Tax Quick View TphysicsLetters Detection of the large-scale tidal field with galaxy multiplet alignment in the Regular Price $1,900.00 Sale Price $950.00 Excluding Sales Tax Quick View Newly listed Tphysletters Violation of γ in Brans-Dicke gravity Regular Price $1,000.00 Sale Price $600.00 Excluding Sales Tax Quick View Astrophysics Observations and detectability of young Suns’ flaring and CME activity in optica Regular Price $1,000.00 Sale Price $450.00 Excluding Sales Tax Quick View TphysicsLetters Tunable structure-activity correlations of molybdenum dichalcogenides (MoX2; X=S Regular Price $2,000.00 Sale Price $400.00 Excluding Sales Tax Quick View New Thphysletters Bayesian and frequentist investigation of prior effects in EFTofLSS analyses of Regular Price $3,000.00 Sale Price $370.00 Excluding Sales Tax Quick View New Thphysletters A search for faint resolved galaxies beyond the Milky Way in DES Year 6: A new f Regular Price $1,900.00 Sale Price $750.00 Excluding Sales Tax Quick View New X-ray polarization properties of partially ionized equatorial obscurers around a Regular Price $800.00 Sale Price $350.00 Excluding Sales Tax Quick View New Unravelling multi-temperature dust populations in the dwarf galaxy Holmberg II Regular Price $1,200.00 Sale Price $400.00 Excluding Sales Tax Quick View New SpookyNet: Advancement in Quantum System Analysis through Convolutional Neural N Regular Price $1,500.00 Sale Price $500.00 Excluding Sales Tax Quick View New Rapid neutron star cooling triggered by accumulated dark matter Regular Price $1,500.00 Sale Price $500.00 Excluding Sales Tax Quick View Newly listed Tphysletters Searching for Radio Outflows from M31* with VLBI Observations Price $300.00 Excluding Sales Tax Load More Abstract We propose a new abstraction set (SynopSet) that has a continuum of visual representations for the explanatory analysis of molecular dynamics simulations (MDS) in the DNA nanotechnology domain. By re-purposing the commonly used progress bar and designing novel visuals, as well as transforming the data from the domain format to a format that better fits the newly designed visuals, we compose this new set of representations. This set is also designed to be capable of showing all spatial and temporal details, and all structural complexity, or abstracting these to various degrees, enabling both the slow playback of the simulation for detailed examinations or very fast playback for an overview that helps to efficiently identify events of interest, as well as several intermediate levels between these two extremes. For any pair of successive representations, we demonstrate smooth, continuous transitions, enabling users to keep track of relevant information from one representation to the next. By providing multiple representations suited to different temporal resolutions and connected by smooth transitions, we enable time-efficient simulation analysis, giving users the opportunity to examine and present important phases in great detail, or leverage abstract representations to go over uneventful phases much faster. Domain experts can thus gain actionable insight about their simulations and communicate it in a much shorter time. Further, the novel representations are more intuitive and also enable researchers unfamiliar with MDS analysis graphs to better understand the simulation results. We assessed the effectiveness of SynopSet on 12 DNA nanostructure simulations together with a domain expert. We have also shown that our set of representations can be systematically located in a visualization space, dubbed SynopSpace, composed of three axes: granularity, visual idiom, and information layout type. Proposed at the end are general guidelines on the use of SynopSpace to generate a new SynopSet for the visualization of other dynamic processes involving hierarchical structures. Introduction DNA nanotechnology [1] uses DNA in its double helix form as building blocks for more complex structures, by leveraging the Watson-Crick base pairing rule, rather than as a genetic information carrier. Two main methods have been developed to assemble DNA nanostructures: scaffolded DNA origami [2] and DNA bricks [3–5]. The assembled structures are ever-increasing and range from simple geometric primitives to large multi-component systems with dynamic behavior. Well-designed nanostructures have shown promising application scenarios, ranging from fundamental studies by acting as substrates for biochemical analysis [6], to medical applications by facilitating targeted drug delivery [7]. A typical current workflow in this domain is to first design the shape of the nanostructure with computer aided design tools. These will usually be able to generate specific DNA sequences for all the strands in the designed structure. Then the structure will be subject to molecular dynamics simulation to investigate its structural stability and dynamic behavior; if it is not stable, or lacks desired properties, several rounds of modifications followed by simulation loops will be performed until the designer is satisfied. Then the finalized DNA sequences will be ordered as oligonucleotides from commercial companies and lab experiments will be performed to assemble the designed structure. Finally, tests will be run, such as observing the shape of the final assembled structure under the microscope. DNA simulations may include tens of thousands of atoms, and many thousands of time steps. If a domain expert wishes to analyze a simulation in atomistic detail through visualization, they will therefore be presented with a great deal of information per step. Visualizing all time steps in a continuous playback presents a vastly greater challenge still, for the sheer number of time steps means that in total, there are thousands of positions to analyze over millions of simulation steps, resulting in an enormous amount of data. Fast playback can in principle keep the analysis reasonably short, but in practice, this means a very large amount of information per second will be presented to the expert, vastly exceeding their ability to comprehend it and make use of it. Playing the simulation at a sufficiently low speed to understand it entails many hours of playback, sometimes more. Yet MDS often exhibit long periods devoid of any important events, which would make such a visualization process not only long and tedious, but very inefficient. Such simulations are sometimes visualized at a slightly coarser granularity, by representing only nucleotides and not individual atoms, which somewhat reduces the amount of information per frame, but falls far short of fully solving the problem. A suitable solution to this problem would provide experts with abstract visualizations to efficiently analyze uneventful phases of their simulations, while still getting an overview of the simulation’s state and its dynamics; but it also needs to provide them with very detailed visualizations for critical phases of the simulation. It would also need to provide smooth, continuous transitions between these representations, for a seamless and time-efficient experience. To solve this, we take advantage of the hierarchical nature of DNA structures to propose involves seven different representations, ranging from very abstract to very detailed. The more abstract ones present less information per simulation step, and involve less (or no) motion of the visual elements themselves, aside from their colors. This makes such representations comfortable to view at high playback speeds, and thus suited to the relatively uneventful phases of DNA simulations. They provide an overview of what happens over a long period of simulation time, but in a short amount of visualization time. On the other hand, they present insufficient detail for the analysis of important events, where experts need detailed information to gain insight into their DNA systems. For such cases, more detailed representations are required, which in turn require lower playback speeds. In summary, the contributions of our solution are: • A new abstraction set (SynopSet) that has a continuum of visual representations for the explanatory analysis of MDS for DNA nanotechnology. • For each representation, i.e., each SynoPoint in SynopSet, we lay out the design rationale and the use of the Ballchain technique used in 5 different SynoPoints. We also demonstrate smooth and continuous transitions between consecutive SynoPoints. • We show the effectiveness of this novel approach to visual organization and information abstraction on the analysis of seven DNA nanotechnology simulations, generate a summary video, and report the feedback from an expert in DNA nanotechnology. • Finally, we observe that all SynoPoints in SynopSet can be located in a visualization space dubbed SynopSpace, composed of three axes: granularity, visual idiom, and information layout type. We also propose general guidelines on how SynopSpace can be used to generate a new SynopSet for the visualization of other dynamic processes involving hierarchical structures. Conclusion DNA nanostructures are ever-increasing in complexity, and understanding their dynamic behavior is key to their research. In this work, we have proposed a visual abstraction set, SynopSet, that spans 7 representations (SynoPoints) to convey the dynamics of DNA nanotechnology simulations at multiple scales, to allow the interactive explanatory analysis of their simulations. The seamless transitions between those representations further helps the user to better understand the dynamic behavior of the MDS, with a lower cognitive burden, particularly to connect the information in the separate representations, thanks to smooth transitions. The most interesting events during a long simulation can thus be quickly identified and examined in further detail. We formalized the description of the SynoPoints with a visualization space called SynopSpace. Its construction and design principles are introduced. We believe there are a variety of other processes that can make use of our concept of visualization space. Biology alone invites further application of SynopSpace as there are many different representations at different granularities, layouts and visual idioms. We submit that the space can be adapted to other domains by adapting the Granularity axis to the domain-relevant concepts, and the Visual Idiom to commonly used visual styles for those granularities. In protein simulation, for instnace, one would only need to change NT to Amino-Acid on the granularity axis to construct the space for it. For cell division as another example, the Granularity axis could have: Cell, Compartment, Organelle, Macromolecule, Molecule, Atom; and the Visual Idiom could be adapted from: Progress bar, Ellipsoid, Stick. Our approach for placing standard visualization techniques in the context of a larger space can lead to systematic discoveries of new visual representations. When inspecting the visualization space in detail, we might see that some idioms are strongly correlated with a certain layout or granularity. It might be that most of the idioms will remain bound by these correlations, but it might also be that some idioms escape their original ties and will form surprising idioms outside their original habitat. For example, the progress bar itself was the highest abstraction, where no structural information is represented. However, here we morph our Progress Bar into multiple Heatbars, Tubes, and eventually Snakes, which is an entirely new way of using the concept of a progress bar. Without placing the progress bar into the three-dimensional visualization space, we might not have found its new promising extended form. Such research methodology applies to various other visualization scenarios where spanning a visualization space by recognizing important dimensions might lead to the development of new, surprisingly effective visual representations. While this work focuses on the visualization of the trajectories that are already generated through molecular dynamics simulations, the concept of SynopSet abstraction and SynopSpace can also be leveraged in the generation of animations for such processes, meaning that the complex behaviors can be first authored in more abstracted representations and then the more detailed animations will be automatically computed, so that the whole animation creation workflow can be made much more efficient. The large data sets1 presented in our work are another side-contribution to the visualization community. Such data sets can be used to test, for example, multiscale visualization, automated camera management systems, automated identification of events and smart labeling according to scales and events. References [1] Nadrian C Seeman. Nucleic acid junctions and lattices. Journal of theoretical biology, 99(2):237–247, 1982. [2] P. W. Rothemund. Folding DNA to create nanoscale shapes and patterns. Nature, 440(7082):297–302, March 2006. [3] Pengfei Wang, Gourab Chatterjee, Hao Yan, Thomas H LaBean, Andrew J Turberfield, Carlos E Castro, Georg Seelig, and Yonggang Ke. Practical aspects of structural and dynamic dna nanotechnology. Mrs Bulletin, 42(12):889–896, 2017. [4] Nadrian C Seeman and Hanadi F Sleiman. Dna nanotechnology. Nature Reviews Materials, 3(1):1–23, 2017. 1The tool and the data sets are available at https://github.com/nanovis/SynopSet . 14 A PREPRINT - MAY 4, 2022 [5] Yonggang Ke, Luvena L Ong, William M Shih, and Peng Yin. Three-dimensional structures self assembled from dna bricks. science, 338(6111):1177–1183, 2012. [6] Arivazhagan Rajendran, Masayuki Endo, and Hiroshi Sugiyama. Single-molecule analysis using DNA origami. Angewandte Chemie International Edition, 51(4):874–890, 2012. [7] Ioanna Mela, Pedro P Vallejo-Ramirez, Stanislaw Makarchuk, Graham Christie, David Bailey, Robert M Henderson, Hiroshi Sugiyama, Masayuki Endo, and Clemens F Kaminski. Dna nanostructures for targeted antimicrobial delivery. Angewandte Chemie, 132(31):12798–12802, 2020. [8] C´elia Fonseca Guerra, F Matthias Bickelhaupt, Jaap G Snijders, and Evert Jan Baerends. Hydrogen bonding in dna base pairs: reconciliation of theory and experiment. Journal of the American Chemical Society, 122(17):4117– 4128, 2000. [9] Sheh-Yi Sheu, Dah-Yen Yang, H. L. Selzle, and E. W. Schlag. Energetics of hydrogen bonds in peptides. Proceedings of the National Academy of Sciences, 100(22):12683–12687, 2003. [10] Prabal K Maiti, Tod A Pascal, Nagarajan Vaidehi, Jiyoung Heo, and William A Goddard III. Atomic-level simulations of seeman dna nanostructures: the paranemic crossover in salt solution. Biophysical journal, 90(5):1463–1479, 2006. [11] Carlos Bustamante, John F Marko, Eric D Siggia, and S Smith. Entropic elasticity of -phage dna. Science, 265(5178):1599–1600, 1994. [12] Benedict EK Snodin, Ferdinando Randisi, Majid Mosayebi, Petr ˇ Sulc, John S Schreck, Flavio Romano, Thomas E Ouldridge, Roman Tsukanov, Eyal Nir, Ard A Louis, et al. Introducing improved structural properties and salt dependence into a coarse-grained model of dna. The Journal of chemical physics, 142(23):06B613 1, 2015. [13] Petr ˇ Sulc, Flavio Romano, Thomas E Ouldridge, Lorenzo Rovigatti, Jonathan PK Doye, and Ard A Louis. Sequence-dependent thermodynamics of a coarse-grained dna model. The Journal of chemical physics, 137(13):135101, 2012. [14] Lorenzo Rovigatti, Petr ˇ Sulc, Istv´an Z Reguly, and Flavio Romano. A comparison between parallelization approaches in molecular dynamics simulations on gpus. Journal of computational chemistry, 36(1):1–8, 2015. [15] Thomas E. Ouldridge, Ard A. Louis, and Jonathan P. K. Doye. Structural, mechanical, and thermodynamic properties of a coarse-grained dna model. The Journal of Chemical Physics, 134(8):085101, Feb 2011. [16] Benedict EK Snodin, Flavio Romano, Lorenzo Rovigatti, Thomas E Ouldridge, Ard A Louis, and Jonathan PK Doye. Direct simulation of the self-assembly of a small dna origami. ACS nano, 10(2):1724–1737, 2016. [17] Jan Byˇska, Mathieu Le Muzic, M Eduard Gr¨oller, Ivan Viola, and Barbora Kozlikova. Animoaminominer: Exploration of protein tunnels and their properties in molecular dynamics. IEEE Transactions on Visualization and Computer Graphics, 22(1):747–756, 2015. [18] Ivan Koles´ar, Julius Parulek, Ivan Viola, Stefan Bruckner, Anne-Kristin Stavrum, and Helwig Hauser. Interactively illustrating polymerization using three-level model fusion. BMC Bioinformatics, 15(1):345–361, 2014. [19] Ivan Koles´ar, Stefan Bruckner, Ivan Viola, and Helwig Hauser. A fractional cartesian composition model for semi-spatial comparative visualization design. IEEE Transactions on Visualization and Computer Graphics, 23(1):851–860, 2016. [20] Juraj P´alenik, Jan Byˇska, Stefan Bruckner, and Helwig Hauser. Scale-space splatting: Reforming spacetime for cross-scale exploration of integral measures in molecular dynamics. IEEE Transactions on Visualization and Computer Graphics, 26(1):643–653, 2019. [21] Elisa de Llano, Haichao Miao, Yasaman Ahmadi, Amanda J Wilson, Morgan Beeby, Ivan Viola, and Ivan Barisic. Adenita: interactive 3d modelling and visualization of dna nanostructures. Nucleic acids research, 48(15):8269–8275, 2020. [22] Shawn M Douglas, Adam H Marblestone, Surat Teerapittayanon, Alejandro Vazquez, George M Church, and William M Shih. Rapid prototyping of 3d dna-origami shapes with cadnano. Nucleic acids research, 37(15):5001– 5006, 2009. [23] Erik Poppleton, Joakim Bohlin, Michael Matthies, Shuchi Sharma, Fei Zhang, and Petr ˇ Sulc. Design, optimization and analysis of large dna and rna nanostructures through interactive visualization, editing and molecular simulation. Nucleic acids research, 48(12):e72–e72, 2020. [24] J. Byˇska, T. Trautner, S.M. Marques, J. Damborsk´y, B. Kozl´ıkov´a, and M. Waldner. Analysis of long molecular dynamics simulations using interactive focus+context visualization. Computer Graphics Forum, 38(3):441–453, 2019. 15 [25] J. Woodring and H. Shen. Multiscale time activity data exploration via temporal clustering visualization spreadsheet. IEEE Transactions on Visualization and Computer Graphics, 15(1):123–137, Jan 2009. [26] Robert Patro, Cheuk Yiu Ip, and Amitabh Varshney. Saliency guided summarization of molecular dynamics simulations. In Dagstuhl Follow-Ups, volume 1. Schloss Dagstuhl-Leibniz-Zentrum fuer Informatik, 2010. [27] Naif Alharbi, Robert S. Laramee, and Matthieu Chavent. MolPathFinder: Interactive Multi-Dimensional Path Filtering of Molecular Dynamics Simulation Data. In Cagatay Turkay and Tao Ruan Wan, editors, Computer Graphics and Visual Computing (CGVC). The Eurographics Association, 2016. [28] Ivan Viola and Tobias Isenberg. Pondering the concept of abstraction in (illustrative) visualization. IEEE Transactions on Visualization and Computer Graphics, 24(9):2573–2588, 2017. [29] Matthew van der Zwan, Wouter Lueks, Henk Bekker, and Tobias Isenberg. Illustrative molecular visualization with continuous abstraction. Computer Graphics Forum, 30(3):683–690, May 2011. [30] Wouter Lueks, Ivan Viola, Matthew van der Zwan, Henk Bekker, and Tobias Isenberg. Spatially continuous change of abstraction in molecular visualization. In IEEE BioVis Abstracts, 2011. [31] H. Mohammed, A. K. Al-Awami, J. Beyer, C. Cali, P. Magistretti, H. Pfister, and M. Hadwiger. Abstractocyte: A visual tool for exploring nanoscale astroglial cells. IEEE Transactions on Visualization and Computer Graphics, 24(1):853–861, Jan 2018. [32] Haichao Miao, Elisa De Llano, Tobias Isenberg, M Eduard Gr¨oller, I Bariˇsi´c, and Ivan Viola. Dimsum: Dimension and scale unifying map for visual abstraction of dna origami structures. Computer Graphics Forum, 37(3):403–413, 2018. [33] Jeffrey Heer and George Robertson. Animated transitions in statistical data graphics. IEEE Trans. Visualization & Comp. Graphics (Proc. InfoVis), 13:1240–1247, 2007. [34] Haichao Miao, Elisa De Llano, Johannes Sorger, Yasaman Ahmadi, Tadija Kekic, Tobias Isenberg, M Eduard Gr¨oller, Ivan Bariˇsi´c, and Ivan Viola. Multiscale visualization and scale-adaptive modification of dna nanostructures. IEEE Transactions on Visualization and Computer Graphics, 24(1):1014–1024, 2017. [35] Peter Mindek, David Kouˇril, Johannes Sorger, Daniel Toloudis, Blair Lyons, Graham Johnson, M Eduard Gr¨oller, and Ivan Viola. Visualization multi-pipeline for communicating biology. IEEE Transactions on Visualization and Computer Graphics, 24(1):883–892, 2017. [36] Gregory S Couch, Donna K Hendrix, and Thomas E Ferrin. Nucleic acid visualization with ucsf chimera. Nucleic acids research, 34(4):e29–e29, 2006. [37] A van Bondi. van der waals volumes and radii. The Journal of physical chemistry, 68(3):441–451, 1964. [38] Megan C Engel, David M Smith, Markus A Jobst, Martin Sajfutdinow, Tim Liedl, Flavio Romano, Lorenzo Rovigatti, Ard A Louis, and Jonathan PK Doye. Force-induced unravelling of dna origami. ACS nano, 12(7):6734– 6747, 2018. [39] Haichao Miao, Tobias Klein, David Kouˇril, Peter Mindek, Karsten Schatz, M Eduard Gr¨oller, Barbora Kozl´ıkov´a, Tobias Isenberg, and Ivan Viola. Multiscale molecular visualization. Journal of molecular biology, 431(6):1049– 1070, 2019. [40] R DEMARIA and JL WILSON. High score!: the illustrated history of electronic games.[sl] mcgraw-hill. Osborne New York, NY, 1, 2002. [41] David Kouˇril, Ondˇrej Strnad, Peter Mindek, Sarkis Halladjian, Tobias Isenberg, M Eduard Gr¨oller, and Ivan Viola. Molecumentary: Adaptable narrated documentaries using molecular visualization. IEEE Transactions on Visualization and Computer Graphics, 2022. [42] JH Saltzer and MF Kaashoek. Principle of least astonishment. Principles of Computer System Design, 2009. [43] Thomas E Ouldridge, Ard A Louis, and Jonathan PK Doye. Dna nanotweezers studied with a coarse-grained model of dna. Physical Review Letters, 104(17):178101, 2010. [44] Jonathan R Burns, Astrid Seifert, Niels Fertig, and Stefan Howorka. A biomimetic dna-based channel for the ligand-controlled transport of charged molecular cargo across a biological membrane. Nature nanotechnology, 11(2):152–156, 2016. [45] Documentation - oxdna. https://dna.physics.ox.ac.uk/index.php/Documentation . (Accessed on 03/26/2022). [46] Yasaman Ahmadi, Ashley L Nord, Amanda J Wilson, Christiane H¨utter, Fabian Schroeder, Morgan Beeby, and Ivan Bariˇsi´c. The brownian and flow-driven rotational dynamics of a multicomponent DNA origami-based rotor. Small, 16(22):2001855, 2020.

bottom of page